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LOC9633154 probable WRKY transcription factor 39 [ Selaginella moellendorffii ]

Gene ID: 9633154, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9633154
Gene description
probable WRKY transcription factor 39
Locus tag
SELMODRAFT_73219
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
Also known as
WRKY_31
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Genomic context

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See LOC9633154 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314270.1 (2276963..2279770)

NW_003314270.1Genomic Context describing neighboring genes Neighboring gene leukotriene A-4 hydrolase homolog Neighboring gene programmed cell death protein 4 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314270 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314270.1 Reference v1.0

    Range
    2276963..2279770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002967673.2 → XP_002967719.2  probable WRKY transcription factor 39

    Conserved Domains (2) summary
    smart00774
    Location:311 → 368
    WRKY; DNA binding domain
    pfam10533
    Location:272 → 308
    Plant_zn_clust; Plant zinc cluster domain
Nucleotide Protein
Heading Accession and Version

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