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araH arabinose ABC transporter membrane subunit [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948923, updated on 10-Oct-2024

Summary

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Official Symbol
araH
Official Full Name
arabinose ABC transporter membrane subunit
Primary source
ECOCYC:EG10059
Locus tag
b4460
See related
ASAP:ABE-0174093
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
b1898; b1899; ECK1897
Summary
The AraFGH arabinose transporter is a member of the ATP Binding Cassette (ABC) transporter superfamily. [More information is available at EcoCyc: EG10059].
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Genomic context

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Sequence:
NC_000913.3 (1982554..1983540, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene universal stress protein C Neighboring gene trehalose-6-phosphate synthase Neighboring gene trehalose-6-phosphate phosphatase Neighboring gene arabinose ABC transporter ATP binding subunit Neighboring gene arabinose ABC transporter periplasmic binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Modeling and studying proteins with molecular dynamics. Schleif R. Methods Enzymol, 2004. PMID 15063645
  2. High-affinity L-arabinose transport operon. Gene product expression and mRNAs. Horazdovsky BF, et al. J Mol Biol, 1987 Sep 5. PMID 2445995
  3. Regulatable arabinose-inducible gene expression system with consistent control in all cells of a culture. Khlebnikov A, et al. J Bacteriol, 2000 Dec. PMID 11092865, Free PMC Article
  4. A yeast gene for trehalose-6-phosphate synthase and its complementation of an Escherichia coli otsA mutant. McDougall J, et al. FEMS Microbiol Lett, 1993 Feb 15. PMID 8467996
  5. Physical map location of the argFGH operon of Escherichia coli. Hendrickson W, et al. J Bacteriol, 1992 Jun. PMID 1592837, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables L-arabinose transmembrane transporter activity EXP
Inferred from Experiment
more info
 PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in L-arabinose transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within arabinose transmembrane transport EXP
Inferred from Experiment
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
arabinose ABC transporter membrane subunit
YP_026162.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1982554..1983540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_026162.2 arabinose ABC transporter membrane subunit [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_026162.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H2V836, A0A192C750, A0A1L7ATU2, A0A1Q6B138, A0A1Q6BH06, A0A1X3I571, A0A1X3IZD1, A0A2A2XKE3, A0A5B9ARA8, A0A8S7EKI4, A0A979GXQ6, A0AA36KY50, A0AAN1S5S6, A0AAP8B8F3, B7MW87, D3GXF4, F4T0M5, J7R5I8
    Conserved Domains (1) summary
    PRK11285
    Location:1 → 328
    araH; L-arabinose transporter permease protein; Provisional
Nucleotide Protein
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