U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

yihI Der GTPase-activating protein YihI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948363, updated on 10-Oct-2024

Summary

Official Symbol
yihI
Official Full Name
Der GTPase-activating protein YihI
Primary source
ECOCYC:EG11835
Locus tag
b3866
See related
ASAP:ABE-0012626
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3859
Summary
yihI is negatively regulated by RpoS in stationary phase. [More information is available at EcoGene: EG11835].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (4051347..4051856)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene GTP-binding protein YihA Neighboring gene ncRNA Neighboring gene coproporphyrinogen III dehydrogenase Neighboring gene uncharacterized protein YshB

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables GTPase activator activity IDA
Inferred from Direct Assay
more info
PubMed 
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of ribosome biogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Der GTPase-activating protein YihI

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4051347..4051856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418302.1 Der GTPase-activating protein YihI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418302.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAQ2LMT7
    Conserved Domains (1) summary
    COG3078
    Location:1147
    YihI; Ribosome assembly protein YihI, activator of Der GTPase [Translation, ribosomal structure and biogenesis]