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dppC dipeptide ABC transporter membrane subunit DppC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948064, updated on 19-Sep-2024

Summary

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Official Symbol
dppC
Official Full Name
dipeptide ABC transporter membrane subunit DppC
Primary source
ECOCYC:EG12626
Locus tag
b3542
See related
ASAP:ABE-0011570
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3529
Summary
Escherichia coli does not normally use exogeneous heme, but heme can be utilized if a foreign OM heme receptor is expressed in Escherichia coli (Letoffe, 2006). [More information is available at EcoGene: EG12626]. DppC is an integral membrane component of the dipeptide ABC transporter. [More information is available at EcoCyc: EG12626].
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Genomic context

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Sequence:
NC_000913.3 (3703859..3704761, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative transporter YhjV Neighboring gene dipeptide ABC transporter ATP binding subunit DppF Neighboring gene dipeptide ABC transporter ATP binding subunit DppD Neighboring gene dipeptide ABC transporter membrane subunit DppB Neighboring gene dipeptide ABC transporter periplasmic binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Direct determination of the properties of peptide transport systems in Escherichia coli, using a fluorescent-labeling procedure. Payne JW, et al. J Bacteriol, 1979 Jan. PMID 368023, Free PMC Article
  2. Spectrophotometric determination of affinities of peptides for their transport systems in Escherichia coli. Perry D, et al. J Bacteriol, 1984 Dec. PMID 6389518, Free PMC Article
  3. The periplasmic dipeptide permease system transports 5-aminolevulinic acid in Escherichia coli. Verkamp E, et al. J Bacteriol, 1993 Mar. PMID 8444807, Free PMC Article
  4. Crystallization and preliminary X-ray analysis of the periplasmic dipeptide binding protein from Escherichia coli. Dunten PW, et al. J Mol Biol, 1993 May 5. PMID 8496961
  5. 2 A resolution structure of DppA, a periplasmic dipeptide transport/chemosensory receptor. Nickitenko AV, et al. Biochemistry, 1995 Dec 26. PMID 8527431

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables dipeptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables dipeptide transmembrane transporter activity RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within dipeptide transmembrane transport RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
involved_in dipeptide transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in heme transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in peptide transport IEA
Inferred from Electronic Annotation
more info
  
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
dipeptide ABC transporter membrane subunit DppC
NP_417999.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3703859..3704761 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417999.1 dipeptide ABC transporter membrane subunit DppC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417999.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6M9QKV4
    Conserved Domains (1) summary
    PRK10913
    Location:1 → 300
    PRK10913; dipeptide ABC transporter permease DppC
Nucleotide Protein
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