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yhjJ peptidase M16 family protein YhjJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948040, updated on 19-Sep-2024

Summary

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Official Symbol
yhjJ
Official Full Name
peptidase M16 family protein YhjJ
Primary source
ECOCYC:EG12254
Locus tag
b3527
See related
ASAP:ABE-0011524
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3512
Summary
pqqL and yhiJ are paralogs. [More information is available at EcoGene: EG12254].
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Genomic context

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Sequence:
NC_000913.3 (3680444..3681940, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene c-di-GMP phosphodiesterase PdeH Neighboring gene 2-dehydro-3-deoxygluconokinase Neighboring gene C4 dicarboxylate/orotate:H(+) symporter Neighboring gene c-di-GMP phosphodiesterase PdeK

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-Wide Screening of Oxidizing Agent Resistance Genes in Escherichia coli. Chen H, et al. Antioxidants (Basel), 2021 May 27. PMID 34072091, Free PMC Article
  2. Conserved and variable functions of the sigmaE stress response in related genomes. Rhodius VA, et al. PLoS Biol, 2006 Jan. PMID 16336047, Free PMC Article
  3. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
  4. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
  5. Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12. Link AJ, et al. Electrophoresis, 1997 Aug. PMID 9298646

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on mature peptide
    Title: Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to hydrogen peroxide IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
peptidase M16 family protein YhjJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3680444..3681940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417984.1 peptidase M16 family protein YhjJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417984.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T5YHV9
    Conserved Domains (1) summary
    COG0612
    Location:22 → 456
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]
Nucleotide Protein
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