U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

fixA putative electron transfer flavoprotein FixA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947316, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
fixA
Official Full Name
putative electron transfer flavoprotein FixA
Primary source
ECOCYC:EG11562
Locus tag
b0041
See related
ASAP:ABE-0000145
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0042; yaaQ
Summary
FixA and FixB are required for anaerobic carnitine reduction . [More information is available at EcoCyc: EG11562].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (42403..43173)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene crotonobetainyl-CoA reductase Neighboring gene L-carnitine:gamma-butyrobetaine antiporter Neighboring gene putative electron transfer flavoprotein FixB Neighboring gene putative oxidoreductase FixC Neighboring gene putative ferredoxin FixX

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The fixA and fixB genes are necessary for anaerobic carnitine reduction in Escherichia coli. Walt A, et al. J Bacteriol, 2002 Jul. PMID 12081978, Free PMC Article
  2. The distance between Escherichia coli genes is related to gene expression levels. Eyre-Walker A. J Bacteriol, 1995 Sep. PMID 7665529, Free PMC Article
  3. Regulation of the carnitine pathway in Escherichia coli: investigation of the cai-fix divergent promoter region. Buchet A, et al. J Bacteriol, 1998 May. PMID 9573142, Free PMC Article
  4. Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region. Yura T, et al. Nucleic Acids Res, 1992 Jul 11. PMID 1630901, Free PMC Article
  5. Molecular characterization of the cai operon necessary for carnitine metabolism in Escherichia coli. Eichler K, et al. Mol Microbiol, 1994 Sep. PMID 7815937

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables electron transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within carnitine catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within carnitine metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative electron transfer flavoprotein FixA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    42403..43173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414583.2 putative electron transfer flavoprotein FixA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414583.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAN3IM07
    Conserved Domains (1) summary
    PRK03359
    Location:1 → 256
    PRK03359; putative electron transfer flavoprotein FixA; Reviewed
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.