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citD citrate lyase acyl carrier protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945415, updated on 19-Sep-2024

Summary

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Official Symbol
citD
Official Full Name
citrate lyase acyl carrier protein
Primary source
ECOCYC:G6343
Locus tag
b0617
See related
ASAP:ABE-0002124
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0610; ybdX
Summary
This component of the |FRAME: [More information is available at EcoCyc: G6343].
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Genomic context

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Sequence:
NC_000913.3 (650487..650783, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene triphosphoribosyl-dephospho-CoA synthase Neighboring gene apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Neighboring gene citrate lyase alpha subunit Neighboring gene citrate lyase beta subunit Neighboring gene citrate lyase synthetase Neighboring gene sensor histidine kinase DpiB Neighboring gene DNA-binding transcriptional dual regulator DpiA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Purification and properties of citrate lyase from Escherichia coli. Nilekani S, et al. Biochemistry, 1983 Sep 27. PMID 6354265
  2. Reevaluation of citrate lyase from Escherichia coli. Quentmeier A, et al. Biochim Biophys Acta, 1987 May 27. PMID 3555623
  3. CORRELATION OF CITRATE UTILIZATION BY MEMBERS OF THE COLON-AEROGENES GROUP WITH OTHER DIFFERENTIAL CHARACTERISTICS AND WITH HABITAT. Koser SA. J Bacteriol, 1924 Jan. PMID 16559027, Free PMC Article
  4. Why a co-substrate is required for anaerobic growth of Escherichia coli on citrate. Lütgens M, et al. J Gen Microbiol, 1980 Jul. PMID 6997437
  5. SOS response induction by beta-lactams and bacterial defense against antibiotic lethality. Miller C, et al. Science, 2004 Sep 10. PMID 15308764

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables prosthetic group binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in citrate metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-independent citrate lyase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
citrate lyase acyl carrier protein
NP_415150.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    650487..650783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415150.1 citrate lyase acyl carrier protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415150.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376VM90
    Conserved Domains (1) summary
    COG3052
    Location:1 → 98
    CitD; Citrate lyase, gamma subunit [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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