U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

allB allantoinase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945134, updated on 2-May-2024

Summary

Go to the top of the page Help
Gene symbol
allB
Gene description
allantoinase
Primary source
ASAP:ABE-0001768
Locus tag
b0512
See related
ECOCYC:G6281
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0505; glxB3; ybbX
Summary
Allantoinase catalyzes the hydrolytic ring cleavage of allantoin, which is the first step in the assimilation of allantoin. [More information is available at EcoCyc: G6281].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (539147..540508)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene tartronate semialdehyde reductase 2 Neighboring gene putative allantoin transporter Neighboring gene putative purine transporter Neighboring gene glycerate 2-kinase 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Crystal structure of metal-dependent allantoinase from Escherichia coli. Kim K, et al. J Mol Biol, 2009 Apr 17. PMID 19248789
  2. Metal ion dependence of recombinant Escherichia coli allantoinase. Mulrooney SB, et al. J Bacteriol, 2003 Jan. PMID 12486048, Free PMC Article
  3. Functional expression and characterization of the two cyclic amidohydrolase enzymes, allantoinase and a novel phenylhydantoinase, from Escherichia coli. Kim GJ, et al. J Bacteriol, 2000 Dec. PMID 11092864, Free PMC Article
  4. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
  5. Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli. Cusa E, et al. J Bacteriol, 1999 Dec. PMID 10601204, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables allantoinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables allantoinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables allantoinase activity IEA
Inferred from Electronic Annotation
more info
  
enables cobalt ion binding IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within allantoin assimilation pathway IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in allantoin catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in purine nucleobase catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in purine nucleobase metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
allantoinase
NP_415045.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    539147..540508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415045.1 allantoinase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415045.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7A7A1A3
    Conserved Domains (1) summary
    PRK08044
    Location:1 → 449
    PRK08044; allantoinase AllB
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.