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ykaA putative PitB transporter accessory protein [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939843, updated on 6-Jun-2024

Summary

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Gene symbol
ykaA
Gene description
putative PitB transporter accessory protein
Locus tag
BSU_12850
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU12850
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Genomic context

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Sequence:
NC_000964.3 (1350482..1351099, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene three-component apoptotic control system component B (antitoxin B) Neighboring gene three-component apoptosis factor (ABC toxin/antitoxin/antitoxin system) Neighboring gene putative low-affinity inorganic phosphate transporter Neighboring gene serine / threonine exchanger Neighboring gene hydroquinone-specific extradiol dioxygenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative PitB transporter accessory protein
NP_389168.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 9696772, 14563871; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    1350482..1351099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389168.1 putative PitB transporter accessory protein [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389168.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4FVK3
    Conserved Domains (1) summary
    COG1392
    Location:1 → 204
    YkaA; Uncharacterized conserved protein YkaA, distantly related to PhoU, UPF0111/DUF47 family [Function unknown]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34454.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases