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ydbD putative manganese-containing catalase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938232, updated on 10-Oct-2024

Summary

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Gene symbol
ydbD
Gene description
putative manganese-containing catalase
Locus tag
BSU_04430
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU04430
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Genomic context

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Sequence:
NC_000964.3 (495740..496561, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene general stress protein glucose starvation induced Neighboring gene putative enzyme; cupin family Neighboring gene hypothetical protein Neighboring gene membrane bound C4-dicarboxylate binding sensor protein Neighboring gene two-component sensor histidine kinase Neighboring gene two-component response regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
putative manganese-containing catalase
NP_388324.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15231799; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    495740..496561 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388324.1 putative manganese-containing catalase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388324.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAP2PV44
    Conserved Domains (1) summary
    pfam05067
    Location:1 → 268
    Mn_catalase; Manganese containing catalase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P80878.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases