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dppE dipeptide ABC transporter (dipeptide-binding lipoprotein) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938099, updated on 4-Apr-2024

Summary

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Gene symbol
dppE
Gene description
dipeptide ABC transporter (dipeptide-binding lipoprotein)
Locus tag
BSU_12960
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU12960
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Genomic context

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Sequence:
NC_000964.3 (1364151..1365800)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene dipeptide ABC transporter (permease) Neighboring gene dipeptide ABC transporter (ATP-binding subunit) Neighboring gene muropeptide L,D-carboxypeptidase Neighboring gene L-Ala-D/L-Glu epimerase Neighboring gene gamma-D-glutamyl-L-diaminoacid endopeptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
dipeptide ABC transporter (dipeptide-binding lipoprotein)
NP_389179.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 7783641, 8793880, 11390694; Product type lp: lipoprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389179.2 dipeptide ABC transporter (dipeptide-binding lipoprotein) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389179.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O34801, P26906
    Conserved Domains (1) summary
    cd08504
    Location:50 → 546
    PBP2_OppA; The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases