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ctc ribosomal protein BL25 (Ctc), binding 5S RNA [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936984, updated on 6-Jun-2024

Summary

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Gene symbol
ctc
Gene description
ribosomal protein BL25 (Ctc), binding 5S RNA
Locus tag
BSU_00520
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU00520
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Genomic context

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Sequence:
NC_000964.3 (58783..59397)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene bifunctional glucosamine-1-phosphate N-acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase Neighboring gene phosphoribosylpyrophosphate synthetase Neighboring gene peptidyl-tRNA hydrolase Neighboring gene protein required for the switch from F to G during sporulation (anti sigma F)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. General stress protein CTC from Bacillus subtilis specifically binds to ribosomal 5S RNA. Korepanov AP, et al. Biochemistry (Mosc), 2004 Jun. PMID 15236599
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. the protein CTC from B. subtilis binds to the same site on 5S rRNA as the ribosomal protein TL5
    Title: General stress protein CTC from Bacillus subtilis specifically binds to ribosomal 5S RNA.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
ribosomal protein BL25 (Ctc), binding 5S RNA
NP_387933.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 8522540, 9669336, 10369900, 12432960, 17198710; Product type f: factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_387933.1 ribosomal protein BL25 (Ctc), binding 5S RNA [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_387933.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G3D9
    Conserved Domains (1) summary
    TIGR00731
    Location:4 → 179
    bL25_bact_ctc; ribosomal protein bL25, Ctc-form
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P14194.4

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases