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LOC9330538 trihelix transcription factor ASIL1 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9330538, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9330538
Gene description
trihelix transcription factor ASIL1
Locus tag
ARALYDRAFT_474535
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9330538 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302555.1 (28933655..28935254)

NW_003302555.1Genomic Context describing neighboring genes Neighboring gene epithiospecifier protein Neighboring gene 17.4 kDa class III heat shock protein Neighboring gene dormancy-associated protein homolog 4 Neighboring gene oligouridylate-binding protein 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302555 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trihelix transcription factor ASIL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302555.1 Reference v.1.0 Primary Assembly

    Range
    28933655..28935254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021014934.1 → XP_020870593.1  trihelix transcription factor ASIL1

    UniProtKB/TrEMBL
    D7KLE1
    Conserved Domains (1) summary
    cl23759
    Location:89 → 174
    GT1; myb-like, SANT family
Nucleotide Protein
Heading Accession and Version

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