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LOC9330419 homeobox-leucine zipper protein ATHB-15 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9330419, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9330419
Gene description
homeobox-leucine zipper protein ATHB-15
Locus tag
ARALYDRAFT_314555
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATHB-15
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Genomic context

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See LOC9330419 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302555.1 (27715448..27720558, complement)

NW_003302555.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110225154 Neighboring gene uncharacterized LOC9330418 Neighboring gene uncharacterized LOC9327739 Neighboring gene tRNase Z TRZ3, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302555 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein ATHB-15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302555.1 Reference v.1.0 Primary Assembly

    Range
    27715448..27720558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021012927.1 → XP_020868586.1  homeobox-leucine zipper protein ATHB-15

    UniProtKB/TrEMBL
    D7KIP0
    Conserved Domains (4) summary
    cd08875
    Location:155 → 371
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    cd14686
    Location:69 → 108
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    pfam00046
    Location:17 → 74
    Homeobox; Homeobox domain
    pfam08670
    Location:692 → 831
    MEKHLA; MEKHLA domain
Nucleotide Protein
Heading Accession and Version

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Research Materials