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LOC9330275 ABSCISIC ACID-INSENSITIVE 5-like protein 4 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9330275, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9330275
Gene description
ABSCISIC ACID-INSENSITIVE 5-like protein 4
Locus tag
ARALYDRAFT_474101
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ABF1
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Genomic context

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See LOC9330275 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302555.1 (25839292..25841902)

NW_003302555.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110224650 Neighboring gene putative fucosyltransferase-like protein Neighboring gene probable receptor-like protein kinase At1g49730 Neighboring gene PI-PLC X domain-containing protein At5g67130 Neighboring gene uncharacterized LOC110224645

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302555 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ABSCISIC ACID-INSENSITIVE 5-like protein 4
Names
abscisic acid responsive element-binding factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302555.1 Reference v.1.0 Primary Assembly

    Range
    25839292..25841902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021011063.1 → XP_020866722.1  ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X1

    UniProtKB/TrEMBL
    D7KF13
    Conserved Domains (1) summary
    cd14707
    Location:316 → 367
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

  2. XM_021011061.1 → XP_020866720.1  ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X1

    UniProtKB/TrEMBL
    D7KF13
    Conserved Domains (1) summary
    cd14707
    Location:316 → 367
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

  3. XM_021011064.1 → XP_020866723.1  ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X2

    Conserved Domains (1) summary
    cd14707
    Location:316 → 368
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

  4. XM_021011062.1 → XP_020866721.1  ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X1

    UniProtKB/TrEMBL
    D7KF13
    Conserved Domains (1) summary
    cd14707
    Location:316 → 367
    bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
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