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LOC9328884 zinc-finger homeodomain protein 14 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9328884, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9328884
Gene description
zinc-finger homeodomain protein 14
Locus tag
ARALYDRAFT_471652
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATHB32
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Genomic context

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See LOC9328884 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302555.1 (6211538..6212391)

NW_003302555.1Genomic Context describing neighboring genes Neighboring gene centlein Neighboring gene protein BASIC PENTACYSTEINE2 Neighboring gene putative clathrin assembly protein At1g14686 Neighboring gene uncharacterized LOC9326134 Neighboring gene 65-kDa microtubule-associated protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302555 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc-finger homeodomain protein 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302555.1 Reference v.1.0 Primary Assembly

    Range
    6211538..6212391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002890025.2 → XP_002890071.1  zinc-finger homeodomain protein 14

    See identical proteins and their annotated locations for XP_002890071.1

    UniProtKB/TrEMBL
    D7KCI5
    Conserved Domains (2) summary
    TIGR01565
    Location:106 → 165
    homeo_ZF_HD; homeobox domain, ZF-HD class
    pfam04770
    Location:7 → 50
    ZF-HD_dimer; ZF-HD protein dimerization region
Nucleotide Protein
Heading Accession and Version

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