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LOC9313770 basic leucine zipper 8 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9313770, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9313770
Gene description
basic leucine zipper 8
Locus tag
ARALYDRAFT_906289
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9313770 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302551.1 (14763473..14764268, complement)

NW_003302551.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At3g49730 Neighboring gene pentatricopeptide repeat-containing protein At3g49740 Neighboring gene inactive LRR receptor-like serine/threonine-protein kinase BIR2 Neighboring gene uncharacterized LOC9313769 Neighboring gene nuclear polyadenylated RNA-binding protein 3 Neighboring gene phytosulfokines 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302551 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper 8
Names
bZIP transcription factor family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302551.1 Reference v.1.0 Primary Assembly

    Range
    14763473..14764268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002877656.2 → XP_002877702.1  basic leucine zipper 8

    See identical proteins and their annotated locations for XP_002877702.1

    UniProtKB/TrEMBL
    D7LSY0
    Conserved Domains (2) summary
    cd14702
    Location:69 → 113
    bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
    pfam06937
    Location:45 → 164
    EURL; EURL protein
Nucleotide Protein
Heading Accession and Version

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