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LOC9312069 telomere repeat-binding factor 3 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9312069, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9312069
Gene description
telomere repeat-binding factor 3
Locus tag
ARALYDRAFT_485345
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9312069 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302551.1 (14811562..14813521)

NW_003302551.1Genomic Context describing neighboring genes Neighboring gene F-box/kelch-repeat protein At5g51250 Neighboring gene uncharacterized LOC9312067 Neighboring gene cysteine-rich and transmembrane domain-containing protein A Neighboring gene ADP-ribosylation factor-like protein 8a Neighboring gene ADP-ribosylation factor-like protein 8a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302551 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telomere repeat-binding factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302551.1 Reference v.1.0 Primary Assembly

    Range
    14811562..14813521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021025606.1 → XP_020881265.1  telomere repeat-binding factor 3

    UniProtKB/TrEMBL
    D7LSZ2
    Conserved Domains (2) summary
    smart00526
    Location:117 → 181
    H15; Domain in histone families 1 and 5
    cd11660
    Location:6 → 56
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
Nucleotide Protein
Heading Accession and Version

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