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LOC9309103 BEL1-like homeodomain protein 9 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9309103, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9309103
Gene description
BEL1-like homeodomain protein 9
Locus tag
ARALYDRAFT_486980
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9309103 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (469595..473026)

NW_003302550.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9307017 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene PRA1 family protein A1 Neighboring gene uncharacterized protein At2g39795, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BEL1-like homeodomain protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302550.1 Reference v.1.0 Primary Assembly

    Range
    469595..473026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021023131.1 → XP_020878790.1  BEL1-like homeodomain protein 9

    UniProtKB/TrEMBL
    D7M772
    Conserved Domains (2) summary
    smart00574
    Location:165 → 292
    POX; domain associated with HOX domains
    pfam05920
    Location:365 → 404
    Homeobox_KN; Homeobox KN domain
Nucleotide Protein
Heading Accession and Version

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