U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9303167 basic leucine zipper 19 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9303167, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9303167
Gene description
basic leucine zipper 19
Locus tag
ARALYDRAFT_912881
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC9303167 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (2533724..2535572, complement)

NW_003302549.1Genomic Context describing neighboring genes Neighboring gene heavy metal-associated isoprenylated plant protein 25 Neighboring gene WD-40 repeat-containing protein MSI3 Neighboring gene probable receptor-like serine/threonine-protein kinase At5g57670 Neighboring gene uncharacterized LOC110226121 Neighboring gene rac-like GTP-binding protein ARAC3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
basic leucine zipper 19
Names
bZIP transcription factor family protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302549.1 Reference v.1.0 Primary Assembly

    Range
    2533724..2535572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002869065.2 → XP_002869111.1  basic leucine zipper 19

    See identical proteins and their annotated locations for XP_002869111.1

    UniProtKB/TrEMBL
    D7MDG4
    Conserved Domains (2) summary
    smart00338
    Location:91 → 152
    BRLZ; basic region leucin zipper
    cd14686
    Location:93 → 146
    bZIP; coiled coil [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials