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LOC9303137 protein NTM1-like 9 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9303137, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9303137
Gene description
protein NTM1-like 9
Locus tag
ARALYDRAFT_491088
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9303137 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (2276773..2279231)

NW_003302549.1Genomic Context describing neighboring genes Neighboring gene protein RKD5 Neighboring gene uncharacterized LOC9305151 Neighboring gene high mobility group B protein 5 Neighboring gene uncharacterized LOC9303139

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein NTM1-like 9
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302549.1 Reference v.1.0 Primary Assembly

    Range
    2276773..2279231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021017154.1 → XP_020872813.1  protein NTM1-like 9 isoform X2

    UniProtKB/TrEMBL
    D7MCZ0
    Conserved Domains (1) summary
    pfam02365
    Location:10 → 135
    NAM; No apical meristem (NAM) protein

  2. XM_021017153.1 → XP_020872812.1  protein NTM1-like 9 isoform X1

    UniProtKB/TrEMBL
    D7MCZ0
    Conserved Domains (1) summary
    pfam02365
    Location:10 → 135
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
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