U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9300540 NAC domain-containing protein 72 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9300540, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9300540
Gene description
NAC domain-containing protein 72
Locus tag
ARALYDRAFT_918808
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC9300540 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302548.1 (17605835..17607185)

NW_003302548.1Genomic Context describing neighboring genes Neighboring gene arabinogalactan peptide 14 Neighboring gene F-box/FBD/LRR-repeat protein At5g56420-like Neighboring gene uncharacterized LOC9300541 Neighboring gene signal recognition particle 19 kDa protein Neighboring gene uncharacterized LOC9300543 Neighboring gene uncharacterized LOC9300544

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003302548 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
NAC domain-containing protein 72

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302548.1 Reference v.1.0 Primary Assembly

    Range
    17605835..17607185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021015798.1 → XP_020871457.1  NAC domain-containing protein 72

    UniProtKB/TrEMBL
    D7MLT1
    Conserved Domains (1) summary
    pfam02365
    Location:21 → 46
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials