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OPG116 Uracil DNA glycosylase superfamily [ Monkeypox virus ]

Gene ID: 929066, updated on 31-Jan-2024

Summary

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Gene symbol
OPG116
Gene description
Uracil DNA glycosylase superfamily
Locus tag
MPXV_gp096
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Monkeypox virus (strain: Zaire-96-I-16, nat-host: Homo sapiens)
Lineage
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus
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Genomic context

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Sequence:
NC_003310.1 (97643..98299)

NC_003310.1Genomic Context describing neighboring genes Neighboring gene mRNA capping enzyme large subunit Neighboring gene Virion protein D2 Neighboring gene Virion core protein D3 Neighboring gene NTPase (1) Neighboring gene Early transcription factor 70 kDa subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003310.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Human monkeypox and smallpox viruses: genomic comparison. Shchelkunov SN, et al. FEBS Lett, 2001 Nov 30. PMID 11734207, Free PMC Article
  2. Ancient Gene Capture and Recent Gene Loss Shape the Evolution of Orthopoxvirus-Host Interaction Genes. Senkevich TG, et al. mBio, 2021 Aug 31. PMID 34253028, Free PMC Article
  3. Classification of human Herpesviridae proteins using Domain-architecture Aware Inference of Orthologs (DAIO). Zmasek CM, et al. Virology, 2019 Mar. PMID 30660046, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Uracil DNA glycosylase superfamily
NP_536528.1
  • Taxonomic breadth: chordopoxvirinae; Old product: E4R; uracil DNA glycosylase; DNA polymerase processivity factor; similar to VACV-WR E4R and VACV-Cop D4R

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003310.1 Reference assembly

    Range
    97643..98299
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_536528.1 Uracil DNA glycosylase superfamily [Monkeypox virus]

    See identical proteins and their annotated locations for NP_536528.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    M1LL92
    UniProtKB/TrEMBL
    A0A650BU64, Q5IXS4, Q8V4Y4, V9NTR1
    Conserved Domains (1) summary
    cd19372
    Location:19 → 218
    UDG_F1_VAVC_D4-like; Uracil DNA glycosylase family 1 subfamily, includes Vaccinia virus protein D4 and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
AAL40559.1

Gene LinkOut

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