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fadE28 acyl-CoA dehydrogenase FadE28 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 888091, updated on 6-Oct-2023

Summary

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Gene symbol
fadE28
Gene description
acyl-CoA dehydrogenase FadE28
Locus tag
Rv3544c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (3983125..3984144, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene lipid transfer protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene acyl-CoA dehydrogenase FadE29 Neighboring gene steroid C26-monooxygenase Neighboring gene acetyl-CoA acetyltransferase FadA Neighboring gene deazaflavin-dependent nitroreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential fadE28 expression associated with phenotypic virulence of Mycobacterium tuberculosis. Lam TH, et al. Microb Pathog, 2008 Jul. PMID 18486437
  2. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  3. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  4. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. FadE28 gene expression was Up-regulated in the hypervirulent strains.
    Title: Differential fadE28 expression associated with phenotypic virulence of Mycobacterium tuberculosis.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
acyl-CoA dehydrogenase FadE28

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    3983125..3984144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_218061.1 acyl-CoA dehydrogenase FadE28 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_218061.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R4MAZ9
    Conserved Domains (1) summary
    COG1960
    Location:1 → 335
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71857.3

Gene LinkOut

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Molecular Biology Databases