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vapB38 antitoxin VapB38 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 887480, updated on 6-Oct-2023

Summary

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Gene symbol
vapB38
Gene description
antitoxin VapB38
Locus tag
Rv2493
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (2808083..2808304)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ribonuclease VapC38 Neighboring gene branched-chain keto acid dehydrogenase E2 component Neighboring gene 3-methyl-2-oxobutanoate dehydrogenase subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
antitoxin VapB38
NP_217009.1
  • part of toxin-antitoxin (TA) operon with Rv2494. This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    2808083..2808304
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_217009.1 antitoxin VapB38 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_217009.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R4LXD1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WJ25.1

Gene LinkOut

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Molecular Biology Databases