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holC DNA polymerase III subunit chi [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 879882, updated on 11-Sep-2024

Summary

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Gene symbol
holC
Gene description
DNA polymerase III subunit chi
Locus tag
PA3832
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4290427..4290855)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene transcriptional regulator Neighboring gene leucyl aminopeptidase Neighboring gene hypothetical protein Neighboring gene valine--tRNA ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the χψ subcomplex of Pseudomonas aeruginosa DNA polymerase III. El Houry Mignan S, et al. BMC Mol Biol, 2011 Sep 28. PMID 21955458, Free PMC Article
  2. DNA polymerase III accessory proteins. III. holC and holD encoding chi and psi. Xiao H, et al. J Biol Chem, 1993 Jun 5. PMID 8389364
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Component Evidence Code Pubs
part_of DNA polymerase III complex ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
DNA polymerase III subunit chi
NP_252521.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4290427..4290855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252521.1 DNA polymerase III subunit chi [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252521.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O68823
    Conserved Domains (1) summary
    PRK05728
    Location:1 → 141
    PRK05728; DNA polymerase III subunit chi; Validated
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O68823.1

Gene LinkOut

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Molecular Biology Databases
Research Materials