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atpF ATP synthase subunit B [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878510, updated on 11-Sep-2024

Summary

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Gene symbol
atpF
Gene description
ATP synthase subunit B
Locus tag
PA5558
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (6252707..6253177, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit alpha Neighboring gene ATP synthase subunit delta Neighboring gene ATP synthase subunit C Neighboring gene ATP synthase subunit A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Stoichiometry of subunits in the H+-ATPase complex of Escherichia coli. Foster DL, et al. J Biol Chem, 1982 Feb 25. PMID 6460031
  2. The Fo subunits of the Escherichia coli F1Fo-ATP synthase are sufficient to form a functional proton pore. Aris JP, et al. J Biol Chem, 1985 Sep 15. PMID 2863271
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables proton-transporting ATP synthase activity, rotational mechanism ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting ATP synthase complex, coupling factor F(o) ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit B
NP_254245.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    6252707..6253177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_254245.1 ATP synthase subunit B [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_254245.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HT16
    Conserved Domains (1) summary
    PRK05759
    Location:1 → 156
    PRK05759; F0F1 ATP synthase subunit B; Validated
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HT16.1

Gene LinkOut

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Molecular Biology Databases
Research Materials