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spuC aminotransferase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878357, updated on 10-Oct-2024

Summary

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Gene symbol
spuC
Gene description
aminotransferase
Locus tag
PA0299
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (336951..338321)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase Neighboring gene glutamine synthetase Neighboring gene putrescine ABC transporter substrate-binding protein SpuD Neighboring gene spermidine ABC transporter substrate-binding protein SpuE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome analysis of agmatine and putrescine catabolism in Pseudomonas aeruginosa PAO1. Chou HT, et al. J Bacteriol, 2008 Mar. PMID 18192388, Free PMC Article
  2. Functional characterization of seven γ-Glutamylpolyamine synthetase genes and the bauRABCD locus for polyamine and β-Alanine utilization in Pseudomonas aeruginosa PAO1. Yao X, et al. J Bacteriol, 2011 Aug. PMID 21622750, Free PMC Article
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables transaminase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within putrescine catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
aminotransferase
NP_248990.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    336951..338321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_248990.1 aminotransferase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_248990.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9I6J2
    Conserved Domains (1) summary
    PRK07480
    Location:4 → 454
    PRK07480; putative aminotransferase; Validated
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9I6J2.1

Gene LinkOut

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Molecular Biology Databases