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dadX alanine racemase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878055, updated on 24-Aug-2024

Summary

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Gene symbol
dadX
Gene description
alanine racemase
Locus tag
PA5302
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (5970686..5971759, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene cytochrome C5 Neighboring gene transcriptional regulator Neighboring gene hypothetical protein Neighboring gene D-amino acid dehydrogenase small subunit Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. report the crystal structure of biosynthetic alanine racemase (Alr) from a pathogenic bacteria Pseudomonas aeruginosa PAO1
    Title: Enzymatic characterization and crystal structure of biosynthetic alanine racemase from Pseudomonas aeruginosa PAO1.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables alanine racemase activity IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
alanine racemase
NP_253989.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    5970686..5971759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_253989.1 alanine racemase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_253989.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    PRK03646
    Location:1 → 355
    dadX; catabolic alanine racemase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HTQ2.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials