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PA0428 ATP-dependent RNA helicase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 877822, updated on 24-Aug-2024

Summary

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Gene symbol
PA0428
Gene description
ATP-dependent RNA helicase
Locus tag
PA0428
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (477886..479805, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene multidrug resistance protein MexB Neighboring gene outer membrane protein OprM Neighboring gene hypothetical protein Neighboring gene 5,10-methylenetetrahydrofolate reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The DEAD-box RNA helicase RhlE2 is a global regulator of Pseudomonas aeruginosa lifestyle and pathogenesis. Hausmann S, et al. Nucleic Acids Res, 2021 Jul 9. PMID 34151378, Free PMC Article
  2. Identification of genes involved in swarming motility using a Pseudomonas aeruginosa PAO1 mini-Tn5-lux mutant library. Overhage J, et al. J Bacteriol, 2007 Mar. PMID 17158671, Free PMC Article
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The DEAD-box RNA helicase RhlE2 is a global regulator of Pseudomonas aeruginosa lifestyle and pathogenesis.
    Title: The DEAD-box RNA helicase RhlE2 is a global regulator of Pseudomonas aeruginosa lifestyle and pathogenesis.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within bacterial-type flagellum-dependent swarming motility IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within single-species biofilm formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase
NP_249119.1
  • 'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    477886..479805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_249119.1 ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_249119.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9I689
    Conserved Domains (1) summary
    PRK10590
    Location:1 → 470
    PRK10590; ATP-dependent RNA helicase RhlE; Provisional
Nucleotide Protein
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Gene LinkOut

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