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SLO1 Slo1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 856928, updated on 2-Nov-2024

Summary

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Official Symbol
SLO1
Official Full Name
Slo1p
Primary source
SGD:S000028437
Locus tag
YER180C-A
See related
AllianceGenome:SGD:S000028437; FungiDB:YER180C-A; VEuPathDB:YER180C-A
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in intracellular protein transport. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See SLO1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_001137.3 (550865..551122, complement)

Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene recombinase DMC1 Neighboring gene Isc10p Neighboring gene tRNA-Ile Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001137.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The ARF-like GTPases Arl1p and Arl3p act in a pathway that interacts with vesicle-tethering factors at the Golgi apparatus. Panic B, et al. Curr Biol, 2003 Mar 4. PMID 12620189
  2. Utilising established SDL-screening methods as a tool for the functional genomic characterisation of model and non-model organisms. Usher J, et al. FEMS Yeast Res, 2015 Dec. PMID 26472754
  3. The nucleotide sequence of Saccharomyces cerevisiae chromosome V. Dietrich FS, et al. Nature, 1997 May 29. PMID 9169868, Free PMC Article
  4. A conserved quality-control pathway that mediates degradation of unassembled ribosomal proteins. Sung MK, et al. Elife, 2016 Aug 23. PMID 27552055, Free PMC Article
  5. Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs. Mount HO, et al. PLoS Genet, 2018 Apr. PMID 29702647, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in intracellular protein transport IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Slo1p
NP_796378.3
  • Protein interacting with Arl3p; Arl3p is a GTPase of the Ras superfamily involved in vesicle-tethering at the Golgi; putative ortholog of human SCOCO

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001137.3 Reference assembly

    Range
    550865..551122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184517.3 → NP_796378.3  TPA: Slo1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_796378.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D3DM90, Q3E784
    UniProtKB/TrEMBL
    A6ZRD8, B3LRU1, C7GS28, C8Z7K5, N1P3Q5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3E784.1

Gene LinkOut

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