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IRC22 Irc22p [ Saccharomyces cerevisiae S288C ]

Gene ID: 856717, updated on 2-Nov-2024

Summary

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Official Symbol
IRC22
Official Full Name
Irc22p
Primary source
SGD:S000000727
Locus tag
YEL001C
See related
AllianceGenome:SGD:S000000727; FungiDB:YEL001C; VEuPathDB:YEL001C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See IRC22 in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_001137.3 (150301..150978, complement)

Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene tubulin-binding prefolding complex subunit GIM4 Neighboring gene dolichyl-diphosphooligosaccharide-protein glycotransferase Neighboring gene alpha-1,3-mannosyltransferase MNN1 Neighboring gene Nop16p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001137.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yeast Irc22 Is a Novel Dsk2-Interacting Protein that Is Involved in Salt Tolerance. Ishii T, et al. Cells, 2014 Mar 27. PMID 24709957, Free PMC Article
  2. Genome-wide analysis of Rad52 foci reveals diverse mechanisms impacting recombination. Alvaro D, et al. PLoS Genet, 2007 Dec. PMID 18085829, Free PMC Article
  3. A complex of Cox4 and mitochondrial Hsp70 plays an important role in the assembly of the cytochrome c oxidase. Böttinger L, et al. Mol Biol Cell, 2013 Sep. PMID 23864706, Free PMC Article
  4. Heme, A Metabolic Sensor, Directly Regulates the Activity of the KDM4 Histone Demethylase Family and Their Interactions with Partner Proteins. Konduri PC, et al. Cells, 2020 Mar 22. PMID 32235736, Free PMC Article
  5. The nucleotide sequence of Saccharomyces cerevisiae chromosome V. Dietrich FS, et al. Nature, 1997 May 29. PMID 9169868, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum HDA PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Irc22p
NP_010915.1
  • hypothetical protein; green fluorescent protein (GFP)-fusion localizes to the ER; YEL001C is non-essential; null mutant displays increased levels of spontaneous Rad52p foci

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001137.3 Reference assembly

    Range
    150301..150978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178816.1 → NP_010915.1  TPA: Irc22p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010915.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A6ZQU6, B3LS11, B5VHD1, C7GKH8, C8Z6Z8, D3DLP6, P40006, Q05243
    UniProtKB/TrEMBL
    G2WCN0, N1P7G1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40006.1

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