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RPS7B ribosomal 40S subunit protein S7B [ Saccharomyces cerevisiae S288C ]

Gene ID: 855628, updated on 18-Sep-2024

Summary

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Official Symbol
RPS7B
Official Full Name
ribosomal 40S subunit protein S7B
Primary source
SGD:S000005040
Locus tag
YNL096C
See related
AllianceGenome:SGD:S000005040; FungiDB:YNL096C; VEuPathDB:YNL096C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be a structural constituent of ribosome. Involved in ribosome biogenesis. Part of small-subunit processome. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 8. Orthologous to human RPS7 (ribosomal protein S7). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RPS7B in Genome Data Viewer
Location:
chromosome: XIV
Exon count:
2
Sequence:
Chromosome: XIV; NC_001146.8 (443398..444315, complement)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene Pho23p Neighboring gene tRNA-Leu Neighboring gene uncharacterized protein Neighboring gene phosphatidate phosphatase APP1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001146.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Association of ribosomal proteins with nascent transcripts in S. cerevisiae. Schroder PA, et al. RNA, 2005 Oct. PMID 16199762, Free PMC Article
  2. The yeast ribosomal protein S7 and its genes. Synetos D, et al. J Biol Chem, 1992 Feb 15. PMID 1737755
  3. Presence of Not5 and ubiquitinated Rps7A in polysome fractions depends upon the Not4 E3 ligase. Panasenko OO, et al. Mol Microbiol, 2012 Feb. PMID 22243599
  4. Farnesol inhibits translation to limit growth and filamentation in C. albicans and S. cerevisiae. Egbe NE, et al. Microb Cell, 2017 Sep 4. PMID 28913344, Free PMC Article
  5. Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways. Ikeuchi K, et al. EMBO J, 2019 Mar 1. PMID 30609991, Free PMC Article

See all (83) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome NAS
Non-traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in rRNA processing IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
  
involved_in ribosomal small subunit biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
  
involved_in ribosome biogenesis IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic small ribosomal subunit NAS
Non-traceable Author Statement
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  
part_of small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of small-subunit processome IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ribosomal 40S subunit protein S7B
NP_014303.3
  • Protein component of the small (40S) ribosomal subunit; interacts with Kti11p; deletion causes hypersensitivity to zymocin; homologous to mammalian ribosomal protein S7, no bacterial homolog; RPS7B has a paralog, RPS7A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 Reference assembly

    Range
    443398..444315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182934.3 → NP_014303.3  TPA: ribosomal 40S subunit protein S7B [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014303.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W184, P48164
    UniProtKB/TrEMBL
    A6ZRY5, B3LNV4, C7GUP5, C8ZGD5, E9P9B7, G2WM09, N1P4E6
    Conserved Domains (1) summary
    pfam01251
    Location:7 → 186
    Ribosomal_S7e; Ribosomal protein S7e
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P48164.1

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