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BUD22 Bud22p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855028, updated on 2-Nov-2024

Summary

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Official Symbol
BUD22
Official Full Name
Bud22p
Primary source
SGD:S000004616
Locus tag
YMR014W
See related
AllianceGenome:SGD:S000004616; FungiDB:YMR014W; VEuPathDB:YMR014W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in maturation of SSU-rRNA. Located in nucleus. Part of 90S preribosome. Orthologous to human SRFBP1 (serum response factor binding protein 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See BUD22 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (298868..300427)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C-22 sterol desaturase Neighboring gene Sok2p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Control of yeast retrotransposons mediated through nucleoporin evolution. Rowley PA, et al. PLoS Genet, 2018 Apr. PMID 29694349, Free PMC Article
  2. BUD22 affects Ty1 retrotransposition and ribosome biogenesis in Saccharomyces cerevisiae. Dakshinamurthy A, et al. Genetics, 2010 Aug. PMID 20498295, Free PMC Article
  3. Ribosomal protein and biogenesis factors affect multiple steps during movement of the Saccharomyces cerevisiae Ty1 retrotransposon. Suresh S, et al. Mob DNA, 2015. PMID 26664557, Free PMC Article
  4. Perturbations of Transcription and Gene Expression-Associated Processes Alter Distribution of Cell Size Values in Saccharomyces cerevisiae. Maitra N, et al. G3 (Bethesda), 2019 Jan 9. PMID 30463882, Free PMC Article
  5. A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Ni L, et al. Mol Biol Cell, 2001 Jul. PMID 11452010, Free PMC Article

See all (39) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in maturation of SSU-rRNA IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in ribosomal small subunit biogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of 90S preribosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleolus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Bud22p
NP_013727.1
  • Protein required for rRNA maturation and ribosomal subunit biogenesis; required for 18S rRNA maturation; also required for small ribosomal subunit biogenesis; cosediments with pre-ribosomal particles; mutation decreases efficiency of +1 Ty1 frameshifting and transposition, and affects budding pattern

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    298868..300427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182510.1 → NP_013727.1  TPA: Bud22p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013727.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZI8, Q04347, Q6B299
    UniProtKB/TrEMBL
    A6ZM76, B3LLR6, G2WK65, N1NY65
    Conserved Domains (1) summary
    pfam09073
    Location:84 → 519
    BUD22
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04347.1

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