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RUD3 Rud3p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854391, updated on 18-Sep-2024

Summary

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Official Symbol
RUD3
Official Full Name
Rud3p
Primary source
SGD:S000005742
Locus tag
YOR216C
See related
AllianceGenome:SGD:S000005742; FungiDB:YOR216C; VEuPathDB:YOR216C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
GRP1
Summary
Enables GTPase binding activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Located in Golgi membrane. Human ortholog(s) of this gene implicated in achondrogenesis type IA. Orthologous to human TSPOAP1 (TSPO associated protein 1) and TRIP11 (thyroid hormone receptor interactor 11). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RUD3 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (747525..748979, complement)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene Spr2p Neighboring gene Aim41p Neighboring gene replication factor C subunit 1 Neighboring gene Ste13p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001147.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The GTPase Arf1p and the ER to Golgi cargo receptor Erv14p cooperate to recruit the golgin Rud3p to the cis-Golgi. Gillingham AK, et al. J Cell Biol, 2004 Oct 25. PMID 15504911, Free PMC Article
  2. Characterization of Grp1p, a novel cis-Golgi matrix protein. Kim DW. Biochem Biophys Res Commun, 2003 Mar 28. PMID 12646213
  3. Interaction of the Saccharomyces cerevisiae cortical actin patch protein Rvs167p with proteins involved in ER to Golgi vesicle trafficking. Friesen H, et al. Genetics, 2005 Jun. PMID 15802519, Free PMC Article
  4. Conserved juxtamembrane domains in the yeast golgin Coy1 drive assembly of a megadalton-sized complex and mediate binding to tethering and SNARE proteins. Anderson NS, et al. J Biol Chem, 2019 Jun 21. PMID 31073031, Free PMC Article
  5. Sec34p, a protein required for vesicle tethering to the yeast Golgi apparatus, is in a complex with Sec35p. VanRheenen SM, et al. J Cell Biol, 1999 Nov 15. PMID 10562277, Free PMC Article

See all (51) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arf1p and Erv14p cooperate to recruit the golgin Rud3p to the cis-Golgi
    Title: The GTPase Arf1p and the ER to Golgi cargo receptor Erv14p cooperate to recruit the golgin Rud3p to the cis-Golgi.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables GTPase binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables small GTPase binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi apparatus ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in Golgi lumen IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Rud3p
NP_014859.3
  • Golgi matrix protein; involved in the structural organization of the cis-Golgi; interacts genetically with COG3 and USO1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    747525..748979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183635.3 → NP_014859.3  TPA: Rud3p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014859.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W2S2, Q12234
    UniProtKB/TrEMBL
    B3LJP0, B5VS97, C7GWG6, N1NX69
    Conserved Domains (2) summary
    TIGR02169
    Location:88 → 382
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    pfam10375
    Location:401 → 449
    GRAB; GRIP-related Arf-binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q12234.1

Gene LinkOut

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