U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ECM9 Ecm9p [ Saccharomyces cerevisiae S288C ]

Gene ID: 853873, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
ECM9
Official Full Name
Ecm9p
Primary source
SGD:S000001712
Locus tag
YKR004C
See related
AllianceGenome:SGD:S000001712; FungiDB:YKR004C; VEuPathDB:YKR004C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
YKR004C-A
Summary
Predicted to contribute to Rab geranylgeranyltransferase activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ECM9 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
2
Sequence:
Chromosome: XI; NC_001143.9 (446799..448036, complement)

Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene polynucleotide adenylyltransferase PAP1 Neighboring gene oxysterol-binding protein OSH6 Neighboring gene uncharacterized protein Neighboring gene mitochondrial 54S ribosomal protein YmL13

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001143.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of new cell size control genes in S. cerevisiae. Dungrawala H, et al. Cell Div, 2012 Dec 12. PMID 23234503, Free PMC Article
  2. Mass-murdering: deletion of twenty-three ORFs from Saccharomyces cerevisiae chromosome XI reveals five genes essential for growth and three genes conferring detectable mutant phenotype. Wysocki R, et al. Gene, 1999 Mar 18. PMID 10095102
  3. Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae. Lussier M, et al. Genetics, 1997 Oct. PMID 9335584, Free PMC Article
  4. Fusion, fission, and transport control asymmetric inheritance of mitochondria and protein aggregates. Böckler S, et al. J Cell Biol, 2017 Aug 7. PMID 28615194, Free PMC Article
  5. Systematic analysis of bypass suppression of essential genes. van Leeuwen J, et al. Mol Syst Biol, 2020 Sep. PMID 32939983, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
contributes_to Rab geranylgeranyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
  
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of Rab-protein geranylgeranyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Ecm9p
NP_012929.4
  • Non-essential hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001143.9 Reference assembly

    Range
    446799..448036 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179794.3 → NP_012929.4  TPA: Ecm9p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012929.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VXU0, Q02202, Q870H4
    UniProtKB/TrEMBL
    A6ZZW9, B3LR88, C7GQG4, C8ZCH0, N1P0F7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q02202.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools