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ATP7 F1F0 ATP synthase subunit d [ Saccharomyces cerevisiae S288C ]

Gene ID: 853853, updated on 2-Nov-2024

Summary

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Official Symbol
ATP7
Official Full Name
F1F0 ATP synthase subunit d
Primary source
SGD:S000001499
Locus tag
YKL016C
See related
AllianceGenome:SGD:S000001499; FungiDB:YKL016C; VEuPathDB:YKL016C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Contributes to proton-transporting ATP synthase activity, rotational mechanism. Involved in proton motive force-driven ATP synthesis. Located in mitochondrion. Part of proton-transporting ATP synthase, stator stalk. Orthologous to human ATP5PD (ATP synthase peripheral stalk subunit d). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ATP7 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
1
Sequence:
Chromosome: XI; NC_001143.9 (407465..407989, complement)

Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene WD-repeat containing protein SWD2 Neighboring gene ATP-dependent 5'-3' DNA helicase HCS1 Neighboring gene Put3p Neighboring gene Urb1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001143.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ATP synthase of yeast mitochondria. Characterization of subunit d and sequence analysis of the structural gene ATP7. Norais N, et al. J Biol Chem, 1991 Sep 5. PMID 1832157
  2. Over-expression of the yeast ATP synthase subunit D in Escherichia coli: use of polyclonal antibodies directed against recombinant subunit D. Norais N, et al. Biochem Biophys Res Commun, 1994 Apr 29. PMID 8179622
  3. Single copies of subunits d, oligomycin-sensitivity conferring protein, and b are present in the Saccharomyces cerevisiae mitochondrial ATP synthase. Bateson M, et al. J Biol Chem, 1999 Mar 12. PMID 10066811
  4. The second stalk of the yeast ATP synthase complex: identification of subunits showing cross-links with known positions of subunit 4 (subunit b). Soubannier V, et al. Biochemistry, 1999 Nov 9. PMID 10555984
  5. Topological and functional study of subunit h of the F1Fo ATP synthase complex in yeast Saccharomyces cerevisiae. Fronzes R, et al. Biochemistry, 2003 Oct 21. PMID 14556635

See all (87) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables proton transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
contributes_to proton-transporting ATP synthase activity, rotational mechanism IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to proton-transporting ATP synthase activity, rotational mechanism IDA
Inferred from Direct Assay
more info
 PubMed 
contributes_to proton-transporting ATP synthase activity, rotational mechanism IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in proton motive force-driven ATP synthesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in proton motive force-driven ATP synthesis IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
  
involved_in proton motive force-driven ATP synthesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion HDA PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
part_of proton-transporting ATP synthase complex, coupling factor F(o) IEA
Inferred from Electronic Annotation
more info
  
part_of proton-transporting ATP synthase, stator stalk IDA
Inferred from Direct Assay
more info
 PubMed 
part_of proton-transporting ATP synthase, stator stalk IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
F1F0 ATP synthase subunit d
NP_012909.3
  • Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001143.9 Reference assembly

    Range
    407465..407989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179582.3 → NP_012909.3  TPA: F1F0 ATP synthase subunit d [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012909.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VXS0, P30902
    UniProtKB/TrEMBL
    B3LR69, B5VMD9, G2WI15, N1P7Y9
    Conserved Domains (1) summary
    pfam05873
    Location:5 → 145
    Mt_ATP-synt_D; ATP synthase D chain, mitochondrial (ATP5H)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P30902.2

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