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SHE2 She2p [ Saccharomyces cerevisiae S288C ]

Gene ID: 853728, updated on 2-Nov-2024

Summary

Official Symbol
SHE2
Official Full Name
She2p
Primary source
SGD:S000001613
Locus tag
YKL130C
See related
AllianceGenome:SGD:S000001613; FungiDB:YKL130C; VEuPathDB:YKL130C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables lipid binding activity and sequence-specific mRNA binding activity. Involved in intracellular mRNA localization and mating type switching. Located in cellular bud tip and cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See SHE2 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
1
Sequence:
Chromosome: XI; NC_001143.9 (195288..196028, complement)

Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene Rci50p Neighboring gene putative tetrahydrofolate synthase Neighboring gene myosin 3 Neighboring gene putative phosphomutase

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables lipid binding IDA
Inferred from Direct Assay
more info
PubMed 
enables mRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables sequence-specific mRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in intracellular mRNA localization IDA
Inferred from Direct Assay
more info
PubMed 
involved_in intracellular mRNA localization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mRNA transport IEA
Inferred from Electronic Annotation
more info
 
involved_in mating type switching IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in cellular bud tip IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol HDA PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
She2p
NP_012792.1
  • RNA-binding protein that binds specific mRNAs and interacts with She3p; part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud; binds to ER-derived membranes and targets mRNAs to cortical ER

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001143.9 Reference assembly

    Range
    195288..196028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179696.1NP_012792.1  TPA: She2p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012792.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A6ZZJ0, B3LQW9, B5VM30, C7GVI5, C8ZC45, D6VX65, P36068
    UniProtKB/TrEMBL
    G2WHQ7, N1P2Z9
    Conserved Domains (1) summary
    pfam11435
    Location:18222
    She2p; RNA binding protein She2p