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ECM8 Ecm8p [ Saccharomyces cerevisiae S288C ]

Gene ID: 852368, updated on 2-Nov-2024

Summary

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Official Symbol
ECM8
Official Full Name
Ecm8p
Primary source
SGD:S000000280
Locus tag
YBR076W
See related
AllianceGenome:SGD:S000000280; FungiDB:YBR076W; VEuPathDB:YBR076W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be involved in cell wall organization. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ECM8 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (390227..391291)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene DNA-dependent ATPase RDH54 Neighboring gene Pff1p Neighboring gene Slm4p Neighboring gene Ecm33p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001134.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Inactivation of Ymr1, Sjl2/3 phosphatases promotes stress resistance and longevity in wild type and Ras2G19V yeast. Mirisola MG, et al. Biomed J, 2024 Apr. PMID 38154617, Free PMC Article
  2. Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae. Lussier M, et al. Genetics, 1997 Oct. PMID 9335584, Free PMC Article
  3. Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis. Vizeacoumar FJ, et al. J Cell Biol, 2010 Jan 11. PMID 20065090, Free PMC Article
  4. A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1. Krogan NJ, et al. Mol Cell, 2003 Dec. PMID 14690608
  5. Genetic interaction network of the Saccharomyces cerevisiae type 1 phosphatase Glc7. Logan MR, et al. BMC Genomics, 2008 Jul 15. PMID 18627629, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Ecm8p
NP_009632.2
  • Non-essential hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    390227..391291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178424.2 → NP_009632.2  TPA: Ecm8p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009632.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQ75, P38246
    UniProtKB/TrEMBL
    A6ZL19, G2W981, N1P9E7
    Conserved Domains (2) summary
    pfam14616
    Location:164 → 282
    DUF4451; Domain of unknown function (DUF4451)
    cl23784
    Location:261 → 342
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38246.2

Gene LinkOut

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