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RRN6 Rrn6p [ Saccharomyces cerevisiae S288C ]

Gene ID: 852269, updated on 2-Nov-2024

Summary

Official Symbol
RRN6
Official Full Name
Rrn6p
Primary source
SGD:S000000110
Locus tag
YBL014C
See related
AllianceGenome:SGD:S000000110; FungiDB:YBL014C; VEuPathDB:YBL014C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables RNA polymerase I general transcription initiation factor binding activity and RNA polymerase I transcription regulatory region sequence-specific DNA binding activity. Involved in nucleolar large rRNA transcription by RNA polymerase I. Part of RNA polymerase I core factor complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See RRN6 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (199064..201748, complement)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene tRNA-Ile Neighboring gene tRNA-Gly Neighboring gene methionyl-tRNA formyltransferase Neighboring gene bifunctional glycerol-3-phosphate/glycerone-phosphate O-acyltransferase SCT1

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Component Evidence Code Pubs
part_of RNA polymerase I core factor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of RNA polymerase I core factor complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of RNA polymerase I core factor complex IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Rrn6p
NP_009539.2
  • Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    199064..201748 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178254.2NP_009539.2  TPA: Rrn6p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009539.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VPY6, P32786
    UniProtKB/TrEMBL
    G2W8Z5
    Conserved Domains (1) summary
    pfam10214
    Location:175878
    Rrn6; RNA polymerase I-specific transcription-initiation factor