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SEO1 putative permease SEO1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 851230, updated on 18-Sep-2024

Summary

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Official Symbol
SEO1
Official Full Name
putative permease SEO1
Primary source
SGD:S000000062
Locus tag
YAL067C
See related
AllianceGenome:SGD:S000000062; FungiDB:YAL067C; VEuPathDB:YAL067C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable allantoate transmembrane transporter activity. Involved in transmembrane transport. Located in cell periphery. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See SEO1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_001133.9 (7235..9016, complement)

Chromosome I - NC_001133.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene seripauperin PAU8 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001133.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of the cadmium-inducible Hansenula polymorpha SEO1 gene promoter by transcriptome analysis and its application to whole-cell heavy-metal detection systems. Park JN, et al. Appl Environ Microbiol, 2007 Oct. PMID 17660305, Free PMC Article
  2. Classification of all putative permeases and other membrane plurispanners of the major facilitator superfamily encoded by the complete genome of Saccharomyces cerevisiae. Nelissen B, et al. FEMS Microbiol Rev, 1997 Sep. PMID 9348664
  3. Sky1 regulates the expression of sulfur metabolism genes in response to cisplatin. Rodríguez-Lombardero S, et al. Microbiology (Reading), 2014 Jul. PMID 24763424, Free PMC Article
  4. The study of methionine uptake in Saccharomyces cerevisiae reveals a new family of amino acid permeases. Isnard AD, et al. J Mol Biol, 1996 Oct 4. PMID 8893857
  5. Regulation of phosphoinositide levels by the phospholipid transfer protein Sec14p controls Cdc42p/p21-activated kinase-mediated cell cycle progression at cytokinesis. Howe AG, et al. Eukaryot Cell, 2007 Oct. PMID 17601877, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables allantoate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in allantoate transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
putative permease SEO1
NP_009333.1
  • Putative permease; member of the allantoate transporter subfamily of the major facilitator superfamily; mutation confers resistance to ethionine sulfoxide

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001133.9 Reference assembly

    Range
    7235..9016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178208.1 → NP_009333.1  TPA: putative permease SEO1 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009333.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VPF0, P39709
    UniProtKB/TrEMBL
    A7A0A0, G2W8Q4
    Conserved Domains (1) summary
    cd17327
    Location:134 → 548
    MFS_FEN2_like; Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39709.1

Gene LinkOut

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