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RPL38 ribosomal 60S subunit protein L38 [ Saccharomyces cerevisiae S288C ]

Gene ID: 851035, updated on 1-Aug-2024

Summary

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Gene symbol
RPL38
Gene description
ribosomal 60S subunit protein L38
Primary source
FungiDB:YLR325C
Locus tag
YLR325C
See related
SGD:S000004317; AllianceGenome:SGD:S000004317; VEuPathDB:YLR325C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in ribonucleoprotein complex assembly. Part of cytosolic large ribosomal subunit. Orthologous to human RPL38 (ribosomal protein L38). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RPL38 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (781143..781379, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene U2-type spliceosomal complex subunit CWC24 Neighboring gene peroxisome biogenesis protein Neighboring gene uncharacterized protein Neighboring gene Tma10p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001144.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Modular Adaptive Ribosome. Yadav A, et al. PLoS One, 2016. PMID 27812193, Free PMC Article
  2. Small and Large Ribosomal Subunit Deficiencies Lead to Distinct Gene Expression Signatures that Reflect Cellular Growth Rate. Cheng Z, et al. Mol Cell, 2019 Jan 3. PMID 30503772, Free PMC Article
  3. Fimbrin phosphorylation by metaphase Cdk1 regulates actin cable dynamics in budding yeast. Miao Y, et al. Nat Commun, 2016 Apr 12. PMID 27068241, Free PMC Article
  4. Ssf1p prevents premature processing of an early pre-60S ribosomal particle. Fatica A, et al. Mol Cell, 2002 Feb. PMID 11864607
  5. The ribosome-bound quality control complex remains associated to aberrant peptides during their proteasomal targeting and interacts with Tom1 to limit protein aggregation. Defenouillère Q, et al. Mol Biol Cell, 2017 May 1. PMID 28298488, Free PMC Article

See all (80) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IC
Inferred by Curator
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 PubMed 
involved_in protein-RNA complex assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal 60S subunit protein L38
NP_013429.1
  • Ribosomal 60S subunit protein L38; homologous to mammalian ribosomal protein L38, no bacterial homolog

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    781143..781379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182214.1 → NP_013429.1  TPA: ribosomal 60S subunit protein L38 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013429.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VYW7, P49167
    UniProtKB/TrEMBL
    A7A1K8, B3RHK0, C7GUB0, C8ZDT6, G2WJE6, N1P1L9
    Conserved Domains (1) summary
    pfam01781
    Location:3 → 75
    Ribosomal_L38e; Ribosomal L38e protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P49167.1

Gene LinkOut

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