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CMS1 Cms1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 850689, updated on 2-Nov-2024

Summary

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Official Symbol
CMS1
Official Full Name
Cms1p
Primary source
SGD:S000003993
Locus tag
YLR003C
See related
AllianceGenome:SGD:S000003993; FungiDB:YLR003C; VEuPathDB:YLR003C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in cytoplasm and nucleus. Part of 90S preribosome. Orthologous to human CMSS1 (cms1 ribosomal small subunit homolog). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See CMS1 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (156855..157730, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Noc3p Neighboring gene Thi73p Neighboring gene TFIIH/NER complex subunit SSL1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001144.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Overexpression of a novel gene, Cms1, can rescue the growth arrest of a Saccharomyces cerevisiae mcm10 suppressor. Wang JW, et al. Cell Res, 2001 Dec. PMID 11787774
  2. Pwp2 mediates UTP-B assembly via two structurally independent domains. Boissier F, et al. Sci Rep, 2017 Jun 9. PMID 28600509, Free PMC Article
  3. Interrelationships between yeast ribosomal protein assembly events and transient ribosome biogenesis factors interactions in early pre-ribosomes. Jakob S, et al. PLoS One, 2012. PMID 22431976, Free PMC Article
  4. The Efg1-Bud22 dimer associates with the U14 snoRNP contacting the 5' rRNA domain of an early 90S pre-ribosomal particle. Beine-Golovchuk O, et al. Nucleic Acids Res, 2024 Jan 11. PMID 38000371, Free PMC Article
  5. Molecular architecture of the 90S small subunit pre-ribosome. Sun Q, et al. Elife, 2017 Feb 28. PMID 28244370, Free PMC Article

See all (46) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
part_of 90S preribosome HDA PubMed 
located_in cytoplasm HDA PubMed 
located_in nucleus HDA PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Cms1p
NP_013103.1
  • Putative subunit of the 90S preribosome processome complex; overexpression rescues supressor mutant of mcm10; null mutant is viable; relocalizes from nucleus to cytoplasm upon DNA replication stress

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    156855..157730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181890.1 → NP_013103.1  TPA: Cms1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013103.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VY05, Q07897
    UniProtKB/TrEMBL
    A7A0Q8, B3LTG8, C7GPF5, C8ZCX5, G2WIJ7, N1P221
    Conserved Domains (1) summary
    cl28899
    Location:102 → 264
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q07897.1

Gene LinkOut

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