U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TAF2 [ Saccharomyces cerevisiae S288C ]

Gene ID: 850409, updated on 22-Aug-2024

Summary

Official Symbol
TAF2
Primary source
FungiDB:YCR042C
Locus tag
YCR042C
See related
SGD:S000000638; AllianceGenome:SGD:S000000638; VEuPathDB:YCR042C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
TAF150; TSM1
Summary
Enables chromatin binding activity. Involved in transcription by RNA polymerase II. Part of transcription factor TFIID complex. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human TAF2 (TATA-box binding protein associated factor 2). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_001135.5 (201174..205397, complement)

Chromosome III - NC_001135.5Genomic Context describing neighboring genes Neighboring gene Ras family guanine nucleotide exchange factor BUD5 Neighboring gene homeodomain mating type protein alpha2 Neighboring gene transcriptional co-activator mating type protein alpha Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uncharacterized protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
contributes_to RNA polymerase II general transcription initiation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chromatin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables transcription cis-regulatory region binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in transcription initiation at RNA polymerase II promoter IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of transcription factor TFIID complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of transcription factor TFIID complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Taf2p
NP_009971.1
  • TFIID subunit (150 kDa); involved in RNA polymerase II transcription initiation

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001135.5 Reference assembly

    Range
    201174..205397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178756.1NP_009971.1  TPA: Taf2p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009971.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VR51, P23255
    UniProtKB/TrEMBL
    B5VEY4
    Conserved Domains (1) summary
    cd09839
    Location:30674
    M1_like_TAF2; TATA binding protein (TBP) associated factor 2