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GFD2 Gfd2p [ Saccharomyces cerevisiae S288C ]

Gene ID: 850321, updated on 2-Nov-2024

Summary

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Official Symbol
GFD2
Official Full Name
Gfd2p
Primary source
SGD:S000000541
Locus tag
YCL036W
See related
AllianceGenome:SGD:S000000541; FungiDB:YCL036W; VEuPathDB:YCL036W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
YCD6
Summary
Predicted to enable nucleic acid binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See GFD2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_001135.5 (59026..60726)

Chromosome III - NC_001135.5Genomic Context describing neighboring genes Neighboring gene Atg22p Neighboring gene Sro9p Neighboring gene dithiol glutaredoxin GRX1 Neighboring gene Lsb5p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001135.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ssd1 is required for thermotolerance and Hsp104-mediated protein disaggregation in Saccharomyces cerevisiae. Mir SS, et al. Mol Cell Biol, 2009 Jan. PMID 18936161, Free PMC Article
  2. An early function during transcription for the yeast mRNA export factor Dbp5p/Rat8p suggested by its genetic and physical interactions with transcription factor IIH components. Estruch F, et al. Mol Biol Cell, 2003 Apr. PMID 12686617, Free PMC Article
  3. TORC1 regulates the transcriptional response to glucose and developmental cycle via the Tap42-Sit4-Rrd1/2 pathway in Saccharomyces cerevisiae. Alfatah M, et al. BMC Biol, 2021 May 6. PMID 33957926, Free PMC Article
  4. A large-scale overexpression screen in Saccharomyces cerevisiae identifies previously uncharacterized cell cycle genes. Stevenson LF, et al. Proc Natl Acad Sci U S A, 2001 Mar 27. PMID 11274415, Free PMC Article
  5. A network of proteins around Rvs167p and Rvs161p, two proteins related to the yeast actin cytoskeleton. Bon E, et al. Yeast, 2000 Sep 30. PMID 10992286

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Gfd2p
NP_009894.1
  • hypothetical protein; identified as a high-copy suppressor of a dbp5 mutation; GFD2 has a paralog, YDR514C, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001135.5 Reference assembly

    Range
    59026..60726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178681.1 → NP_009894.1  TPA: Gfd2p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009894.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQX9, P25370
    UniProtKB/TrEMBL
    B3LU46, B5VES4
    Conserved Domains (1) summary
    cl10012
    Location:380 → 475
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P25370.1

Gene LinkOut

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