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UNC119B unc-119 lipid binding chaperone B [ Homo sapiens (human) ]

Gene ID: 84747, updated on 2-Nov-2024

Summary

Official Symbol
UNC119Bprovided by HGNC
Official Full Name
unc-119 lipid binding chaperone Bprovided by HGNC
Primary source
HGNC:HGNC:16488
See related
Ensembl:ENSG00000175970 MIM:620513; AllianceGenome:HGNC:16488
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
POC7B
Summary
Enables lipid binding activity. Involved in cilium assembly and lipoprotein transport. Located in ciliary transition zone. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in thyroid (RPKM 22.0), ovary (RPKM 19.5) and 24 other tissues See more
Orthologs
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Genomic context

See UNC119B in Genome Data Viewer
Location:
12q24.31
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (120710458..120723640)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (120699614..120712778)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (121148261..121161443)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene calcium binding protein 1 Neighboring gene uncharacterized LOC105370029 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7147 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4961 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4962 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7148 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7149 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:121124755-121125256 Neighboring gene uncharacterized LOC124903035 Neighboring gene uncharacterized LOC124903036 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:121148178-121149020 Neighboring gene malectin Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:121163301-121163802 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:121176341-121177046 Neighboring gene microRNA 4700 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:121185508-121185723 Neighboring gene acyl-CoA dehydrogenase short chain Neighboring gene ReSE screen-validated silencer GRCh37_chr12:121200901-121201064 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:121209105-121209605 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:121220845-121222044 Neighboring gene signal peptide peptidase like 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7150 Neighboring gene ARF GTPase 1 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
An atlas of genetic influences on human blood metabolites.
EBI GWAS Catalog
Human metabolic individuality in biomedical and pharmaceutical research.
EBI GWAS Catalog

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC5139

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables lipid binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables lipid binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cilium assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in lipoprotein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in lipoprotein transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in nervous system development IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in ciliary transition zone IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cilium IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cilium TAS
Traceable Author Statement
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
protein unc-119 homolog B
Names
POC7 centriolar protein homolog B
unc-119 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080533.3NP_001074002.1  protein unc-119 homolog B

    See identical proteins and their annotated locations for NP_001074002.1

    Status: VALIDATED

    Source sequence(s)
    AC069234, AL137327, BC070088, DA324219
    Consensus CDS
    CCDS31914.1
    UniProtKB/Swiss-Prot
    A6NIH7
    UniProtKB/TrEMBL
    B3KX02
    Related
    ENSP00000344942.4, ENST00000344651.5
    Conserved Domains (1) summary
    pfam05351
    Location:89247
    GMP_PDE_delta; GMP-PDE, delta subunit

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    120710458..120723640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    120699614..120712778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_032661.1: Suppressed sequence

    Description
    NM_032661.1: This RefSeq was permanently suppressed because it contains the wrong CDS.