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PLMT phospholipid N-methyltransferase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844425, updated on 7-Sep-2023

Summary

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Gene symbol
PLMT
Gene description
phospholipid N-methyltransferase
Primary source
Araport:AT1G80860
Locus tag
AT1G80860
See related
TAIR:AT1G80860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS PHOSPHOLIPID N-METHYLTRANSFERASE; ATPLMT; F23A5.21; F23A5_21; phospholipid N-methyltransferase
Summary
Encodes a single-copy phospholipid N-methyltransferase, involved in phosphatidylcholine biosynthesis. Has specific activity towards phosphatidylmonomethylethanolamine and phosphatidyldimethylethanolamine, but not phosphatidylethanolamine.
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Genomic context

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See PLMT in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (30387978..30389434, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene WRKY DNA-binding protein 40 Neighboring gene DNA glycosylase superfamily protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Protein kinase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional characterization of phospholipid N-methyltransferases from Arabidopsis and soybean. Keogh MR, et al. J Biol Chem, 2009 Jun 5. PMID 19366698, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_106734.2
NM_179585.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidyl-N-dimethylethanolamine N-methyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phosphatidyl-N-methylethanolamine N-methyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within methylation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in phosphatidylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phospholipid biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in intracellular membrane-bounded organelle IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
phospholipid N-methyltransferase
NP_565246.1
  • phospholipid N-methyltransferase (PLMT); CONTAINS InterPro DOMAIN/s: Phospholipid methyltransferase (InterPro:IPR007318); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_849916.2
  • phospholipid N-methyltransferase (PLMT); CONTAINS InterPro DOMAIN/s: Phospholipid methyltransferase (InterPro:IPR007318); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    30387978..30389434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_179585.4 → NP_849916.2  phospholipid N-methyltransferase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849916.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GWP8, Q9SAH5
    UniProtKB/TrEMBL
    A0A5S9WW65, A0A654ESG0
    Conserved Domains (1) summary
    PLN02797
    Location:1 → 164
    PLN02797; phosphatidyl-N-dimethylethanolamine N-methyltransferase

  2. NM_106734.2 → NP_565246.1  phospholipid N-methyltransferase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565246.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GWP8, Q9SAH5
    UniProtKB/TrEMBL
    A0A5S9WW65, A0A654ESG0
    Conserved Domains (1) summary
    PLN02797
    Location:1 → 164
    PLN02797; phosphatidyl-N-dimethylethanolamine N-methyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SAH5.1

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