AGL67 AGAMOUS-like 67 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Gene symbol: AGL67
Gene description: AGAMOUS-like 67
Primary source: Araport:AT1G77950
Locus tag: AT1G77950
See related: TAIR:AT1G77950
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: AGAMOUS-like 67; F28K19.16; F28K19_16
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Genomic context

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See AGL67 in Genome Data Viewer

Location:: chromosome: 1

Exon count:: 13

Sequence:: Chromosome: 1; NC_003070.9 (29306824..29311194)

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001124144.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein dimerization activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: AGAMOUS-like 67

NP_001117616.1

AGAMOUS-like 67 (AGL67); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NP_177918.2

AGAMOUS-like 67 (AGL67); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 5849 Blast hits to 5849 proteins in 680 species: Archae - 0; Bacteria - 0; Metazoa - 631; Fungi - 305; Plants - 4834; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003070.9 Reference assembly

Range

29306824..29311194

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001334806.1 → NP_001322357.1 AGAMOUS-like 67 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A654EV27, A0A7G2E3S7, F4I8L6

Conserved Domains (1) summary

cl00109
Location:2 → 75

MADS; MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptonal regulators. Binds DNA and exists as hetero and homo-dimers. Composed of 2 main subgroups: SRF-like/Type I and MEF2-like (myocyte enhancer factor 2)/ Type ...
NM_001334807.1 → NP_001322358.1 AGAMOUS-like 67 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A654EV27, A0A7G2E3S7, F4I8L6

Conserved Domains (1) summary

cl00109
Location:2 → 75

MADS; MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptonal regulators. Binds DNA and exists as hetero and homo-dimers. Composed of 2 main subgroups: SRF-like/Type I and MEF2-like (myocyte enhancer factor 2)/ Type ...
NM_106444.3 → NP_177918.2 AGAMOUS-like 67 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_177918.2

Status: REVIEWED

UniProtKB/TrEMBL

A0A654EV27, A0A7G2E3S7, F4I8L6

Conserved Domains (1) summary

cl00109
Location:2 → 75

MADS; MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptonal regulators. Binds DNA and exists as hetero and homo-dimers. Composed of 2 main subgroups: SRF-like/Type I and MEF2-like (myocyte enhancer factor 2)/ Type ...
NM_001124144.1 → NP_001117616.1 AGAMOUS-like 67 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001117616.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A654EV27, A0A7G2E3S7, F4I8L6

Conserved Domains (1) summary

cl00109
Location:2 → 75

MADS; MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptonal regulators. Binds DNA and exists as hetero and homo-dimers. Composed of 2 main subgroups: SRF-like/Type I and MEF2-like (myocyte enhancer factor 2)/ Type ...