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NAP NAC-like, activated by AP3/PI [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843282, updated on 18-Sep-2024

Summary

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Official Symbol
NAP
Official Full Name
NAC-like, activated by AP3/PI
Primary source
TAIR:AT1G69490
Locus tag
AT1G69490
See related
Araport:AT1G69490
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
activated by AP3/PI; ACTIVATED BY AP3/PI; ANAC029; Arabidopsis NAC domain containing protein 29; ATNAP; F10D13.14; F10D13_14; NAC-like; NAC-LIKE
Summary
Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.
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Genomic context

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See NAP in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (26122080..26123514)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene heat shock protein-binding protein Neighboring gene EXS (ERD1/XPR1/SYG1) family protein Neighboring gene Ribosomal L32p protein family Neighboring gene cytochrome P450, family 704, subfamily B, polypeptide 1 Neighboring gene cAMP-regulated phosphoprotein 19-related protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NAP is involved in GA-mediated chlorophyll degradation and leaf senescence by interacting with DELLAs in Arabidopsis. Lei W, et al. Plant Cell Rep, 2020 Jan. PMID 31646371
  2. Local Changes in Chromatin Accessibility and Transcriptional Networks Underlying the Nitrate Response in Arabidopsis Roots. Alvarez JM, et al. Mol Plant, 2019 Dec 2. PMID 31526863
  3. Arabidopsis AtNAP regulates fruit senescence. Kou X, et al. J Exp Bot, 2012 Oct. PMID 23066145, Free PMC Article
  4. AtNAP, a NAC family transcription factor, has an important role in leaf senescence. Guo Y, et al. Plant J, 2006 May. PMID 16640597
  5. A homolog of NO APICAL MERISTEM is an immediate target of the floral homeotic genes APETALA3/PISTILLATA. Sablowski RW, et al. Cell, 1998 Jan 9. PMID 9489703

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. NAP is a novel component of the regulatory network that modulates the progress of leaf senescence in gibberellins signaling.
    Title: NAP is involved in GA-mediated chlorophyll degradation and leaf senescence by interacting with DELLAs in Arabidopsis.
  2. NAP functions as a negative regulator in osmotic stress responses. NAP regulates AREB1 in salt stress response.
    Title: Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
  3. NAP promotes chlorophyll degradation by enhancing transcription of AAO3, which leads to increased levels of the senescence-inducing hormone ABA.
    Title: A NAP-AAO3 regulatory module promotes chlorophyll degradation via ABA biosynthesis in Arabidopsis leaves.
  4. Arabidopsis silique senescence is highly controlled by AtNAP. Silique senescence is delayed and the respiration surge associated with endogenous or exogenous ethylene is suppressed in the atnap knockout mutant plants.
    Title: Arabidopsis AtNAP regulates fruit senescence.
  5. Expression of AtNAP is closely associated with the senescence process of Arabidopsis rosette leaves.
    Title: AtNAP, a NAC family transcription factor, has an important role in leaf senescence.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_105616.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryo development ending in seed dormancy IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within flower development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within fruit ripening IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in fruit ripening IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within leaf senescence IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within multidimensional cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NAC-like, activated by AP3/PI
NP_564966.1
  • NAC-like, activated by AP3/PI (NAP); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 25 (TAIR:AT1G61110.1); Has 3046 Blast hits to 3040 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3046; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    26122080..26123514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105616.4 → NP_564966.1  NAC-like, activated by AP3/PI [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564966.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49255, Q8LD99
    UniProtKB/TrEMBL
    A0A178W8K0, A0A5S9WR22, A0A654EMG1
    Conserved Domains (1) summary
    pfam02365
    Location:10 → 134
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O49255.1

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