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GDSL-like Lipase/Acylhydrolase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842238, updated on 18-Sep-2024

Summary

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Official Full Name
GDSL-like Lipase/Acylhydrolase superfamily protein
Primary source
TAIR:AT1G59406
Locus tag
AT1G59406
See related
Araport:AT1G59406
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T4M14.17; T4M14_17
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (21844352..21846019, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Inositol-pentakisphosphate 2-kinase family protein Neighboring gene Ribosomal protein S5 family protein Neighboring gene B-block-binding subunit of TFIIIC protein Neighboring gene B-block-binding subunit of TFIIIC protein Neighboring gene B-block-binding subunit of TFIIIC protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables lipase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
GDSL-like Lipase/Acylhydrolase superfamily protein
NP_564741.3
  • GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G58725.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    21844352..21846019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104641.4 → NP_564741.3  GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564741.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3H492, F4IBF0, P0DI15, Q3ECM4, Q93W97
    UniProtKB/TrEMBL
    A0A654EJE2
    Conserved Domains (1) summary
    cd01837
    Location:29 → 344
    SGNH_plant_lipase_like; SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4IBF0.2
P0DI15.1
Q3ECM4.2

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